Gene/Marker | Genotype distribution | Allele test | GRSb | |||
---|---|---|---|---|---|---|
CHB (n = 955) | PC (n = 761) | Allelea | OR (95% CI) | P-value | ||
CFB/rs12614 | CC(829) | CC(550) | C | 1 | – | 1 |
CT(91) | CT(142) | T | 0.44 (0.33–0.57) | 6.46 × 10− 10 | 0.44 | |
TT(3) | TT(7) | 0.22 | ||||
HLA-DPB1/rs9277535c | GG(420) | GG(184) | G | 1 | – | 1 |
GA(428) | GA(384) | A | 0.49 (0.43–0.56) | 9.47 × 10−24 | 0.49 | |
AA(107) | AA(193) | 0.25 | ||||
HLA-DPA1/rs3077c | GG(489) | GG(221) | G | 1 | – | 1 |
GA(382) | GA(385) | A | 0.48 (0.41–0.55) | 1.84 × 10−24 | 0.48 | |
AA(84) | AA(155) | 0.24 | ||||
HLA-DQB1/rs2856718c | CC(226) | CC(263) | C | 1 | – | 1 |
CT(418) | CT(373) | T | 1.72 (1.50–1.97) | 3.10 × 10−15 | 1.72 | |
TT(311) | TT(125) | 3.44 | ||||
HLA-DQB2/rs7453920c | GG(743) | GG(461) | G | 1 | – | 1 |
GA(196) | GA(275) | A | 0.49 (0.41–0.60) | 1.07 × 10−13 | 0.49 | |
AA(16) | AA(25) | 0.25 | ||||
TCF19/rs1419881c | TT(419) | TT(270) | T | 1 | – | 1 |
TC(424) | TC(361) | C | 0.74 (0.64–0.85) | 3.46 × 10−5 | 0.74 | |
CC(112) | CC(130) | 0.37 | ||||
EHMT2/rs652888c | TT(610) | TT(565) | T | 1 | – | 1 |
TC(300) | TC(188) | C | 1.65 (1.37–1.99) | 5.14 × 10−8 | 1.65 | |
CC(45) | CC(8) | 3.3 | ||||
OCT4/rs1265163c | GG(401) | GG(392) | G | 1 | – | 1 |
GC(439) | GC(299) | C | 1.32 (1.14–1.53) | 1.36 × 10−4 | 1.32 | |
CC(114) | CC(70) | 2.64 | ||||
EHMT2/rs35875104c | TT(878) | TT(650) | T | 1 | – | 1 |
TC(75) | TC(108) | C | 0.53 (0.39–0.71) | 2.42 × 10− 5 | 0.53 | |
CC(2) | CC(3) | 0.27 | ||||
VARS2-SFTA/rs9394021c | AA(303) | AA(189) | A | 1 | – | 1 |
AG(471) | AG(368) | G | 0.73 (0.64–0.84) | 1.10 × 10−5 | 0.73 | |
GG(177) | GG(203) | 0.37 | ||||
VARS2-SFTA/rs2517459c | GG(809) | GG(560) | G | 1 | – | 1 |
GA(139) | GA(193) | A | 0.53 (0.43–0.67) | 3.71 × 10−8 | 0.53 | |
AA(6) | AA(8) | 0.27 |