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Table 1 Genes, corresponding genomic regions and protein products included in the COL6-CGH micro-array design.

From: Identification of a deep intronic mutation in the COL6A2 gene by a novel custom oligonucleotide CGH array designed to explore allelic and genetic heterogeneity in collagen VI-related myopathies

Genes

Chromosomal Coordinates (NCBI Build 35)

Proteins

HSPG2

chr1:21894043-22010053

Heparan sulfate proteoglycan 2

COL6A3

Chr2:237914662-238204820

Collagen, type VI, alpha-3 chain

COL29A1;

COL6A6

Chr3:131447049-131978580

Collagen, type XXIX, alpha 1

Collagen type VI alpha 6

ITGA1;

ITGA2

chr5:52019893-52526365

Integrin, alpha 1

Integrin, alpha 2

TNXB

chr6:32116611-32186183

Tenascin XB

ITGB1

chr10:33130501-33364492

Integrin, beta 1

DCN

chr12:90041504-90075827

Decorin

ITGA5;

ITGA7

chr12:52975314-54487894

Integrin, alpha 5;

Integrin, alpha 7

CSPG4

chr15:73654019-73892151

Chondroitin sulfate proteoglycan 4

COL6A1;

COL6A2

chr21:46126091-46474147

Collagen, type VI, alpha 1 chain Collagen, type VI, alpha 2 chain

BGN

chrX:152181258-152395851

Biglycan