From: Genetic polymorphisms of PIP5K2A and course of schizophrenia
SNPs | Haplotype | Frequency | Group 1, Group 2 frequencies | Chi square | Pasym | PPerm |
---|---|---|---|---|---|---|
rs736203/rs943190 | TT | 0.571 | 0.565, 0.585 | 0.269 | 0.6043 | 0.9971 |
CC | 0.342 | 0.332, 0.366 | 0.836 | 0.3606 | 0.9437 | |
TC | 0.046 | 0.053, 0.031 | 1.715 | 0.1904 | 0.7448 | |
CT | 0.040 | 0.050, 0.018 | 4.463 | 0.0346 | 0.2097 | |
rs10430590/rs1132816 | AA | 0.570 | 0.557, 0.608 | 1.397 | 0.2372 | 0.5328 |
TA | 0.211 | 0.211, 0.212 | 0.001 | 0.9750 | 1.0 | |
AG | 0.127 | 0.128, 0.126 | 0.005 | 0.9451 | 0.9998 | |
TG | 0.091 | 0.104, 0.054 | 3.990 | 0.0458 | 0.1130 | |
rs943190/rs1132816 | TA | 0.497 | 0.501, 0.487 | 0.108 | 0.7430 | 0.9812 |
CA | 0.285 | 0.268, 0.334 | 2.827 | 0.0927 | 0.2276 | |
TG | 0.117 | 0.117, 0.119 | 0.008 | 0.9309 | 0.9998 | |
CG | 0.101 | 0.115, 0.061 | 4.276 | 0.0386 | 0.0946 | |
rs11013052/rs1132816 | CA | 0.643 | 0.632, 0.675 | 1.075 | 0.2998 | 0.6804 |
AA | 0.139 | 0.137, 0.145 | 0.079 | 0.7791 | 0.9898 | |
AG | 0.114 | 0.129, 0.073 | 4.119 | 0.0424 | 0.1423 | |
CG | 0.104 | 0.103, 0.107 | 0.029 | 0.8652 | 0.9973 | |
rs1132816/rs943194 | AG | 0.606 | 0.595, 0.637 | 1.004 | 0.3163 | 0.9144 |
AC | 0.175 | 0.173, 0.183 | 0.099 | 0.7535 | 0.9998 | |
GC | 0.175 | 0.175, 0.103 | 5.158 | 0.0231 | 0.1419 | |
GG | 0.063 | 0.058, 0.077 | 0.786 | 0.3754 | 0.9502 |