Gene/Transcript | Genomic alteration (hg19) | Protein alteration | COSMIC or other ID | TAF pre-chemo | Depth | TAF after cycle 3 | Depth |
---|---|---|---|---|---|---|---|
APC NM_001127511.2 | chr5 g.112173590C > T | p.(Gln749*) | COSM 4166473 | 49% | 6171 | 6% | 7055 |
TP53 NM_000546.5 | chr17 g.7577094G > A | p.(Arg282Trp) | COSM 1636702 | 39% | 4369 | 5% | 4875 |
KRAS NM_033360.2 | chr12 g.25398284C > T | p.(Gly12Asp) | COSM521 | 32% | 3910 | 4% | 5003 |
THSD7B NM_001080427.1 | chr2 g.137988706G > A | p.(Glu575Lys) | rs746487130 | 21% | 5101 | 3% | 5467 |
FBXW7 NM_001013415.1 | amplification (CNV) | – | – | ca. 25%1 | ca. 5000 | ca. 43%1 | ca. 7000 |