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Table 1 SNPs showing association to TID or AITD in the family material from northern Sweden

From: Association of CD247 (CD3ζ) gene polymorphisms with T1D and AITD in the population of northern Sweden

Disease

Chr

SNP

Gene

p-value

T1D

1p13

rs6679677

PTPN22

4.5x10-4

T1D

1p13

rs2476601

PTPN22

4.5x10-4

T1D

1q24

rs6668182

CD247

0.007

T1D

1q24

rs2988276

CD247

3.8x10-5

T1D

1q24

rs7523351

CD247

0.012

T1D

1q24

rs10918695

CD247

0.006

T1D

1q24

rs12144621

CD247

0.036

T1D

1q24

rs863455

CD247

0.025

T1D

1q24

rs704852

CD247

0.029

T1D

6p21

rs9270986

HLA-DRB1

1.8x10-6

T1D

11p15

rs1004446

INS

0.011

T1D

11p15

rs6356

INS

0.020

T1D

11p15

rs7111341

INS

0.021

AITD

1q24

rs17534481

CD247

0.018

AITD

1q24

rs12095738

CD247

0.022

AITD

2q24

rs1990760

IFIH1

0.032

AITD

2q33

rs3087243

CTLA4

0.039

AITD

11p15

rs6356

INS

0.014

AITD

12q24

rs17696736

C12orf30

0.032

  1. An association (p-value < 0.05) was found for 19 of the 79 SNPs on the GoldenGate Custom Panel with T1D or AITD using the family based association test (FBAT) (http://www.hsph.harvard.edu/fbat/default.html). P-values were not corrected for multiple testing