SNP Namea | SNP IDb | Chr12 Positionc | Location | Amino Acid Change | RegDB Scored | Major/Minor Alleles | MAF | β | SE | R2 (%) | P | FDR | Secondary Trait (Effect) | Top 3 Variants |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HDL-C | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 p20207 | rs11057853 | 125329313 | Intron 1 |  | 5 | G/A | 0.4484 | 0.4082 | 0.1925 | 1.0650 | 0.0343 | 0.4235 |  |  |
 p20741 | rs11057851 | 125328779 | Intron 1 |  | 5 | C/T | 0.3237 | −0.5924 | 0.2067 | 1.3010 | 0.0043 | 0.1465 | ApoA-I (↓) | Top 1 |
 p45516 | rs1902569 | 125304004 | Intron 1 |  | 5 | G/A | 0.1544 | 0.5447 | 0.2629 | 0.6390 | 0.0386 | 0.4375 |  |  |
 p49690 | rs4765615 | 125299830 | Intron 2 |  | 5 | G/A | 0.4426 | −0.4646 | 0.1866 | 0.9330 | 0.0130 | 0.2526 | ApoA-I (↓) |  |
 p79828 | rs838895 | 125269692 | Intron 11 |  | 5 | C/G | 0.3171 | 0.4961 | 0.2059 | 0.8220 | 0.0162 | 0.2756 | ApoA-I (↑) |  |
ApoA-I | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 p20741 | rs11057851 | 125328779 | Intron 1 |  | 5 | C/T | 0.3237 | −1.2331 | 0.5117 | 0.8600 | 0.0162 | 0.3186 | HDL-C (↓) |  |
 p49690 | rs4765615 | 125299830 | Intron 2 |  | 5 | G/A | 0.4426 | −0.9139 | 0.4614 | 0.6770 | 0.0480 | 0.5022 | HDL-C (↓) |  |
 p55963 | rs7134858 | 125293557 | Intron 6 |  | 6 | C/T | 0.1560 | 1.7537 | 0.6260 | 1.0710 | 0.0052 | 0.2918 |  | Top 2 |
 p63483 | rs838912 | 125286037 | Intron 7 |  | 7 | G/A | 0.0867 | 1.8700 | 0.8230 | 0.6880 | 0.0234 | 0.3972 |  |  |
 p64772 | rs5888 | 125284748 | Exon 8 | Ala350Ala | 3a | C/T | 0.0961 | 2.0962 | 0.7888 | 0.9460 | 0.0080 | 0.2918 |  | Top 3 |
 p79721 | rs838896 | 125269799 | Intron 11 |  | 5 | G/C | 0.3104 | 1.1147 | 0.5056 | 0.7270 | 0.0278 | 0.4197 |  |  |
 p79828 | rs838895 | 125269692 | Intron 11 |  | 5 | C/G | 0.3171 | 1.2206 | 0.5074 | 0.7800 | 0.0164 | 0.3186 | HDL-C (↑) |  |
 p83884 | rs701106 | 125265636 | Intron 12 |  | 5 | C/T | 0.2597 | 1.2967 | 0.5352 | 0.7770 | 0.0156 | 0.3186 |  |  |