From: Association analysis of chromosome 1 migraine candidate genes
 | N | Alleles |  |  | Genotypes |  |
Group | (alleles) | C | T | CC | CT | TT |
ATP 1A4 SNP | rs 6427504 | Â | Â | Â | Â | Â |
Migraine | 466 | 167 (35.8%) | 299 (64.2%) | 30 (12.9%) | 107 (45.9%) | 96 (41.2%) |
Male | 64 | 22 (34.4%) | 42 (65.6%) | 4 (12.5%) | 14 (43.8%) | 14 (43.8 %) |
Female | 402 | 145 (36.1%) | 257 (63.9%) | 26 (12.9%) | 93 (46.3%) | 82 (40.8%) |
MA | 382 | 139 (36.4%) | 243 (63.6%) | 24 (12.6%) | 91 (47.6%) | 76 (39.8%) |
MO | 74 | 26 (35.1%) | 48 (64.9%) | 5 (13.6%) | 16 (43.2%) | 16 (43.2%) |
Control | 416 | 167 (40%) | 251 (60%) | 38 (18.2%) | 91 (43.5%) | 80 (38.3%) |
Male | 66 | 25 (37.9%) | 41 (62.1%) | 5 (15.2%) | 15 (45.5%) | 13 (39.3%) |
Female | 352 | 142 (40.3%) | 210 (59.7%) | 33 (18.8%) | 76 (43.1 %) | 67 (38.1%) |
Total case vs control | Â | X 2 = 1.59 | P = 0.207 | Â | X 2 = 2.39 | P = 0.302 |
Subtype MA vs cont: | Â | X 2 = 1.07 | P = 0.30 | Â | X 2 = 2.46 | P = 0.29 |
Subtype MO vs cont | Â | X 2 = 0.61 | P = 0.43 | Â | X 2 = 0.59 | P = 0.74 |
 | N | Alleles |  |  | Genotypes |  |
Group | (alleles) | C | T | CC | CT | TT |
CAS Q1 SNP | rs 3747623 | Â | Â | Â | Â | Â |
Migraine | 446 | 288 (63.2%) | 168 (36.8%) | 93 (40.8%) | 102 (44.7%) | 33 (14.5%) |
Male | 68 | 45 (66.2%) | 23 (33.8%) | 16 (47.1%) | 13 (38.2%) | 5 (14.7 %) |
Female | 388 | 243 (62.6%) | 145 (37.4%) | 77 (39.7%) | 89 (45.9%) | 28 (14.4%) |
MA | 376 | 235 (62.5%) | 141 (37.5%) | 76 (40.4%) | 83 (44.1%) | 29 (15.4%) |
MO | 66 | 42 (63.6%) | 24 (36.4%) | 12 (36.4%) | 18 (54.3%) | 3 (9.1%) |
Control | 430 | 281 (65.3%) | 149 (34.7%) | 89 (41.4%) | 103 (47.9%) | 23 (10.7%) |
Male | 66 | 38 (59.4%) | 26 (40.6%) | 11 (34.4%) | 16 (50%) | 5 (15.6%) |
Female | 352 | 243 (66.4%) | 123 (33.6%) | 78(47.1%) | 87 (38.2 %) | 18 (14.7%) |
Total case vs control | Â | X 2 = 0.46 | P = 0.496 | Â | X 2 = 1.48 | P = 0.473 |
Subtype MA vs cont: | Â | X 2 = 0.71 | P = 0.40 | Â | X 2 = 2.07 | P = 0.36 |
Subtype MO vs cont | Â | X 2 = 0.07 | P = 0.78 | Â | X 2 = 0.51 | P = 0.77 |
 | N | Alleles |  |  | Genotypes |  |
Group | (alleles) | C | T | CC | CT | TT |
KCNJ9 SNP | rs 2494211 | Â | Â | Â | Â | Â |
Migraine | 466 | 322 (66.5%) | 162 (33.5%) | 113 (46.7%) | 96 (39.7%) | 33 (13.6%) |
Male | 70 | 41 (58.6%) | 29 (41.4%) | 12 (34.3%) | 17 (48.6%) | 6 (17.1 %) |
Female | 414 | 281 (67.9%) | 133 (32.1%) | 101 (48.8%) | 79 (38.2%) | 27 (13%) |
MA | 392 | 262 (66.8%) | 130 (33.2%) | 94 (48%) | 74 (37.8%) | 28 (14.2%) |
MO | 74 | 48 (64.9%) | 26 (35.1%) | 15 (40.5%) | 18 (48.6%) | 4 (10.9%) |
Control | 486 | 308 (63.4%) | 178 (36.6%) | 95 (39.1%) | 118 (48.6%) | 30 (12.3%) |
Male | 70 | 41 (58.6%) | 29 (41.4%) | 11 (31.4%) | 19 (54.3%) | 5 (14.3%) |
Female | 416 | 267 (64.2%) | 149 (35.8%) | 84 (40.4%) | 99 (47.6 %) | 25 (12%) |
Total case vs control | Â | X 2 = 1.06 | P = 0.303 | Â | X 2 = 3.96 | P = 0.138 |
Subtype MA vs cont: | Â | X 2 = 1.14 | P = 0.28 | Â | X 2 = 5.19 | P = 0.07 |
Subtype MO vs cont | Â | X 2 = 0.06 | P = 0.80 | Â | X 2 = 0.08 | P = 0.96 |
 | N | Alleles |  |  | Genotypes |  |
Group | (alleles) | C | T | CC | CT | TT |
KCNJ10 SNP | rs1130183 | Â | Â | Â | Â | Â |
Migraine | 440 | 408 (92.7%) | 32 (7.3%) | 189 (85.9%) | 30 (13.6%) | 1 (0.5%) |
Male | 66 | 59 (89.4%) | 7 (10.6%) | 26 (78.8%) | 7 (21.2%) | 0 |
Female | 374 | 349 (93.3%) | 25 (6.7%) | 163 (87.2%) | 23 (12.3%) | 1 (0.5%) |
MA | 356 | 332 (93.3%) | 24 (6.7%) | 155 (87.1%) | 22 (12.4%) | 1 (0.6%) |
MO | 66 | 63 (95.5%) | 3 (4.5%) | 30 (90.9%) | 3 (9.1%) | 0 |
Control | 422 | 394 (93.4%) | 28 (6.6%) | 189 (89.6%) | 16 (7.6%) | 6 (2.8%) |
Male | 62 | 57 (91.9%) | 5 (8.1%) | 27 (87.1%) | 3 (9.7%) | 1 (3.2%) |
Female | 360 | 337 (93.6%) | 23 (6.4%) | 162 (90%) | 13 (7.2 %) | 5 (2.8%) |
Total case vs control | Â | X 2 = 0.14 | P = 0.713 | Â | X 2 = 7.65 | P = 0.02 |
Subtype MA vs cont: | Â | X 2 = 0 | P = 0.95 | Â | X 2 = 5.12 | P = 0.08 |
Subtype MO vs cont | Â | X 2 = 0.42 | P = 0.52 | Â | X 2 = 1.02 | P = 0.59 |
 | N | Alleles |  |  | Genotypes |  |
Group | (alleles) | A | G | AA | AG | GG |
CACNA1E SNP | rs 704326 | Â | Â | Â | Â | Â |
Migraine | 464 | 384 (83%) | 80 (17%) | 154 (66%) | 76 (33%) | 2 (1%) |
Male | 142 | 134 (94.4%) | 8 (5.6%) | 63 (88.7%) | 8 (11.3%) | 0 |
Female | 308 | 240 (77.9%) | 68 (22.1%) | 89 (57.8%) | 62 (40.3%) | 3 (1.9%) |
MA | 276 | 224 (81%) | 52 (19%) | 88 (64%) | 48 (35%) | 2 (1%) |
MO | 188 | 160 (85%) | 28 (15%) | 66 (70%) | 28 (30%) | 0 |
Control | 424 | 341 (80%) | 83 (20%) | 132 (63%) | 77 (36%) | 3 (1%) |
Male | 116 | 101 (87.1%) | 15 (12.9%) | 43 (74.1%) | 15 (25.9%) | 0 |
Female | 308 | 240 (77.9%) | 68 (22.1%) | 89(57.8%) | 62 (40.3 %) | 3 (1.9%) |
Total case vs control | Â | X 2 = 1.00 | P = 0.6 | Â | X 2 = 0.81 | P = 0.37 |
Subtype MA vs cont: | Â | X 2 = 0.06 | P = 0.80 | Â | X 2 = 0.09 | P = 0.96 |
Subtype MO vs cont | Â | X 2 = 1.92 | P = 0.16 | Â | X 2 = 2.78 | P = 0.25 |