- Research article
- Open Access
Associations between interleukin-1 gene polymorphisms and sepsis risk: a meta-analysis
BMC Medical Genetics volume 15, Article number: 8 (2014)
Previous epidemiological studies have presented conflicting evidence regarding associations between interleukin-1 (IL-1) polymorphisms and sepsis susceptibility. We have performed a meta-analysis to evaluate possible associations between IL-1 polymorphisms and sepsis risk.
Eligible literature was retrieved from PubMed, Embase and Web of Knowledge databases until Jun 15, 2013. The pooled odds ratio (OR) and 95% confidence interval (CI) were calculated using random-effects model in the overall and subgroup analysis based on ethnicity, sepsis severity and quality score.
Eighteen studies addressing five IL-1 polymorphisms were included in this meta-analysis. For IL-1A-889 (rs1800587) polymorphism, significant association was observed in overall comparison for allelic effect (OR = 1.47, 95% CI = 1.01-2.13, P = 0.04). There were no significant associations between either IL-1B-511 (rs16944) or IL-1B-31 (rs1143627) and sepsis susceptibility in overall or subgroup analyses. For IL-1B + 3594 (rs143634) polymorphism, genotype TT decreased sepsis risk in overall analysis (OR = 0.59, 95% CI = 0.36-0.97, P = 0.04), as well as in Caucasian (OR = 0.57, 95% CI = 0.34-0.95, P = 0.03) and sepsis (OR = 0.55, 95% CI = 0.31-0.97, P = 0.04) subgroup analysis. For IL-1RN VNTR polymorphism, significant association was observed in overall comparison for allelic effect (OR = 1.40, 95% CI = 1.01-1.95, P = 0.04). Furthermore, the effect sizes of IL-1RN VNTR on sepsis risk increased with disease severity (septic shock OR > severe sepsis OR > sepsis OR).
Our meta-analysis indicated that IL-1A-889, IL-1B + 3954 and IL-1RN VNTR might be associated with sepsis susceptibility. However, further studies with larger sample sizes and from homogenous populations would be necessary to validate these findings.
Sepsis is a complex clinical syndrome that results from a systemic inflammatory response to bacteria and/or bacterial products . Though there have been many advances in the development of antibiotics and supportive care, sepsis remains a serious and deadly problem with high mortality rates worldwide . Therefore, predictive markers to identify high-risk patients are urgently needed for early detection and preventive care of sepsis. Cytokines play vital roles in the regulation of host immune response, and altered expression of cytokines is proven to be involved the development of sepsis . Previous research suggests that the variations in the genes encoding cytokines are also involved in the inflammatory responses and are responsible for inter-individual differences in susceptibility to sepsis and in its severity . Delineating the variations in cytokine genes, and associated differences in response to sepsis might contribute to the development of new genetically tailored diagnostic and therapeutic interventions that may improve outcome in sepsis patients.
Interleukin-1 (IL-1) family is a critical mediator of immune response to sepsis with two agonists (IL-1α and IL-1β) and one antagonist (IL-1 receptor antagonist: IL-1ra) [5–7]. Excessive IL-1 production is directly linked to the development of shock, multi-organ system failure, and death in patients and animals with sepsis, systemic inflammatory response syndrome, and septic shock . Clinical trials with recombinant IL-1ra in the treatment of sepsis showed the highest mortality rate in those patients treated with the largest dose of IL-1ra, suggesting that overproduction of either pro-inflammatory mediators (IL-1α and IL-1β) or anti-inflammatory cytokines (IL-1ra) might lead to organ dysfunction and even death .
IL-1A, IL-1B and IL-1RN genes (encoding IL-1α, IL-1β, and IL-1ra, respectively) are located next to each other within the cluster of human major histocompatibility complex in the q13-21 area of human chromosome 2 . Five SNPs in IL-1 genes have been most frequently studied in relation to sepsis risk: one SNP at promoter position −889 in the IL-1A gene, two SNPs at promoter position −511 and −31 and one SNP in exon 5 at position +3954 of the IL-1B gene and a variable number of tandem repeats (VNTR) of 86-bp sequence in intron 2 of IL-1RN gene, 5 alleles of which have been reported (1 to 5) corresponding to 4, 2, 5, 3 and 6 copies of 86-bp sequence, respectively. Thus, the IL-1RN alleles were further divided into two categories: long genotype (L: including alleles 1, 3, 4, and 5) and short genotype (2: allele 2 only). The genotypes were classified as L/L, L/2, and 2/2 .
Recently, a number of studies regarding the associations between IL-1 polymorphisms and sepsis risk have been published [11–27]. However, the results reported from these studies are inconsistent and inconclusive. We performed a meta-analysis to further investigate the associations between IL-1 polymorphisms and sepsis risk, which may help us to better clarify the effect of these polymorphisms on sepsis susceptibility.
Identification and eligibility of relevant study
Relevant articles were identified through a literature search using the keywords “IL-1 or interleukin-1 or IL1” and “sepsis or severe sepsis or septic shock” and “polymorphism or genetic variant or mutation” in Pubmed, Embase, and Web of Knowledge databases until Jun 15, 2013. All searched articles were retrieved and their references were checked for other relevant publications.
The inclusion criteria were: (a) studies evaluating the association between IL-1 polymorphisms and sepsis risk, (b) case–control study or cohort design, (c) sufficient data (genotype distributions of cases and controls), and (d) studies written in English. We excluded reviews, comments and articles from which the necessary data could not be extracted nor obtained after contacting the authors. In cases of overlapping studies, only the study with the largest sample size was included.
To minimize the bias and improve the reliability, two researchers reviewed these articles with the inclusion and exclusion criteria independently and reached a consensus.
Data extraction was independently performed by two investigators and discrepancies were settled by reaching a consensus. Information such as the first author’s name, publication year, country and ethnicity of participants, sepsis severity, genotyping method, genotype number or allele frequencies for cases and controls was collected from each study using a standardized data collection protocol. For studies including subjects of different populations, data were extracted separately.
Quality assessment was performed with the Newcastle-Ottawa quality assessment scale (NOS) . A ‘star system’ has been used to judge data quality based on three broad perspectives: the selection, comparability and outcome of interest. Stars are added up to compare the study quality in a quantitative fashion. The scores ranged from 0 to 9 stars. Studies with scores of 7 stars or greater were considered to be of high quality. Based on these criteria, the content validity was evaluated by J-WG and C-LY, and any disagreement was resolved via discussions between and or with the other authors for adjudication.
The associations between IL-1 polymorphisms and sepsis risk were estimated by calculating pooled ORs and 95%CI under the dominant (BB + AB vs. AA), recessive (BB vs. AB + AA), and allelic (B vs. A) genetic models respectively (B represented minor allele, A represented major allele). A random-effects model, using Mantel-Haenszel method, was used to calculate pooled ORs. The significance of pooled ORs was determined with Z tests (P < 0.05 was considered statistically significant). Departure from Hardy-Weinberg equilibrium (HWE) in controls was tested via a Chi-square test at a significance level of P < 0.05. Heterogeneity between studies was assessed using the Cochrane Q test and the I2 statistic . Multivariate meta-regression was performed to explore potential sources of heterogeneity among the following covariates: ethnicity (divided into Asian, Caucasian and others), sepsis severity (divided into sepsis, severe sepsis and septic shock), sources of controls (divided into community- or hospital-based) and sample size using REML method of random-effects when the number of studies was more than or equal to 10 . Subgroup analyses were carried out based on ethnicity, severity of sepsis, and quality score. To assess the stability of the pooled results, sensitivity analysis was performed by sequentially excluding individual studies one by one. The publication bias was examined by funnel plot  and Egger’s test . To adjust the values for multiple comparisons in subgroup analyses, we used the Benjamini-Hochberg (BH) step-up correction method, which control the false discovery rate (FDR) . All statistical tests were performed using Review Manager 5.2 (The Cochrane Collaboration, Oxford, UK) and STATA11.0 software (StataCorp LP, College Station, Texas, USA).
Characteristics of eligible studies
A total of 429 articles were identified update to Jun 15, 2013 (107 from PubMed, 144 from Embase, and 178 from Web of Knowledge). After scanning the abstracts and checking the full-text articles, seventeen articles met the inclusion criteria. Furthermore, two populations containing Caucasian and Black subjects were included in one article by Johnson et al.  which was therefore considered as two independent studies (referred to as Johnson-1 and Johnson-2) in the following data analysis. Thus, 18 studies addressing five polymorphisms in IL-1 gene were included in our meta-analysis (Flow diagram shown in Figure 1).
The characteristics of included studies are listed in Table 1. Of these 18 studies, eight were conducted in Caucasian, six in Asian, two in Hispanic, one in African-American, and one in Jewish/Arabic populations. Except for one study for IL-1B + 3594 and another for IL-1RN VNTR, the genotype frequency distributions of others were in agreement with HWE (Table 1). Quality scores for individual studies ranged from 6 to 9, with 78% (14 of 18) of the studies being classified as high quality (score ≥ 7) (Additional file 1: Table S1). The classical polymerase chain reaction (PCR) and PCR-restriction fragment length polymorphism (PCR-RFLP) were the most commonly used genotyping method in these studies.
Quantitative data synthesis
Only two studies [15, 17] with high quality containing 193 cases and 193 controls evaluated the association of the IL-1A-889 polymorphism (rs1800587) with sepsis risk. In overall comparison, a significant association was observed for allelic effect (OR = 1.47, 95% CI = 1.01-2.13, P = 0.04). There were no statistically significant associations between this polymorphism and sepsis risk under dominant or recessive models (Additional file 2: Figure S1, Table 2).
IL-1B-511 (rs16944) and −31(rs1143627) polymorphisms
Seven studies [12–15, 17, 34] totaling 745 cases and 750 controls were identified in order to investigate the association between IL-1B-511 polymorphism (rs16944) and sepsis risk. Overall, the results showed no associations under any genetic model. Removal of the low score study ( with score = 6), did not alter these results. In addition, there was no association in any subgroup analysis, either based on ethnicity or sepsis severity under any genetic model (Additional file 2: Figure S2, Table 2).
For the IL-1B-31 polymorphism (rs1143627), four studies [14–16, 22] with high quality totaling 405 cases and 824 controls were identified. Similar to IL-1B-511 polymorphism, there were no significant associations detected between rs1143627 and sepsis risk overall or in any subgroup analysis for any genetic model (Additional file 2: Figure S3, Table 2).
IL-1B + 3594(rs143634) polymorphism
Six studies [13, 20, 23, 24, 27] containing 680 cases and 998 controls were identified that evaluated the association between the IL-1B + 3594 polymorphism (rs143634) and sepsis risk. In the overall comparison, the IL-1B + 3594 polymorphism was significantly associated with sepsis risk in the recessive effect (OR = 0.59, 95% CI = 0.36-0.97, P = 0.04, PFDR = 0.12) (Figure 2, Additional file 2: Figure S4). In the subgroup analyses based on ethnicity and sepsis subtype, the significant results persisted in the Caucasian populations (OR = 0.57, 95% CI = 0.34-0.95, P = 0.03, PFDR = 0.09) and in sepsis subgroup patients (OR = 0.55, 95% CI = 0.31-0.97, P = 0.04, PFDR = 0.12). However, the negative results for Asians, severe sepsis, and septic shock group patients might be not reliable because only one study was performed in each subgroup (Table 2). After the exclusion of the study by Fang et al. , whose genotypic distribution in controls deviated from HWE (PHWE = 0.03), the results did not vary significantly (OR = 0.55, 95% CI = 0.31-0.97, P = 0.04, PFDR = 0.12 for overall studies; OR = 0.51, 95% CI = 0.28-0.93, P = 0.03, PFDR = 0.09 for Caucasian populations). Furthermore, the results of stratified analysis based on quality score were not statistically significant.
For the IL-1RN VNTR polymorphism, ten studies [11, 12, 17, 19, 21, 24–27, 34] comprised of 701 cases and 1227 controls were identified. However, one study by Bessler et al.  that deviated from HWE (PHWE = 0.002) was not included into the final meta-analysis. The overall results suggested there was statistically significant association of this polymorphism with sepsis risk under allelic model (OR = 1.40, 95% CI = 1.01-1.95, P = 0.04, PFDR = 0.12) (Figure 3, Additional 1: Additional file 2: Figure S5). A similar trend was observed in Asian patients (OR = 1.69, 95% CI = 1.01-2.84) although the results were not statistically significant (P = 0.05, PFDR = 0.15). Further stratified analyses based on sepsis severity showed that the effect sizes of IL-1RN VNTR on sepsis risk increased with disease severity (septic shock patients > severe sepsis patients > sepsis patients). These findings needed to be interpreted with caution since only one or two studies were included under the three genetic models. Furthermore, stratified analysis based on quality score indicated that there was not significant association in the high quality studies (Quality score ≥7) (Table 2).
As shown in Table 2, obvious evidence (P < 0.1 and I2 > 50%) for heterogeneity between studies was found for IL-1B-511 or IL-1RN VNTR under all three genetic models, and for IL-1B-31 under dominant and allelic models. No evidence for heterogeneity between studies was found for IL-1A-889 or IL-1B + 3594 under any genetic model.
To explore potential sources of between-study heterogeneity in our assessment of IL-1RN VNTR polymorphism and sepsis susceptibility, meta-regression was conducted for all three genetic models. The confounding factors included ethnicity, sepsis severity, sources of controls, and sample size. However, the result did not indicate that any of these potential factors was a major source of heterogeneity (P-value for regression all > 0.05) (Additional file 3: Table S2-S4). Indeed, the heterogeneity might be attributable to other factors, which regrettably remain undefined due to insufficient data. For the other two polymorphisms (IL-1B-511 and −31), meta-regression was not performed due to the small number of included studies.
We removed one study per time from the overall pooled analysis to evaluate the influence of the removed data set on the pooled ORs. The corresponding pooled ORs under any genetic model were not materially altered for IL-1A-889, IL-1B-511, and −31, respectively (Additional file 4: Table S5-S7). However, for IL-1B + 3594, two studies (Johnson-1 et al.  and Balding et al. ) altered the corresponding statistical P value of association under the recessive model (Additional file 4: Table S8b). For IL-1RN VNTR, one study (Garcia-Segarra et al. ) was identified as the main cause of heterogeneity. After exclusion of this study, the heterogeneity no longer existed, moreover, positive association was increased under all three genetic models (Additional file 4: Table S9).
Publication bias was examined by funnel plots and Egger’s test under all genetic models. After combining all studies, a little asymmetry was observed for IL-1RN VNTR polymorphism (Figures 4, 5 and 6), but Egger’s test did not show evidence of publication bias (dominant: P = 0.519, recessive: P = 0.724, allelic: P = 0.640). For IL-1A-889, IL-1B-511, -31, and +3594 polymorphisms, publication bias testing was not performed due to the small number of included studies (n < 9).
In this meta-analysis, two polymorphisms (IL-1B + 3594 and IL-1RN VNTR) were significantly associated with sepsis susceptibility in overall comparison and subgroup analyses based on sepsis severity, whereas IL-1A-889 polymorphism influenced sepsis risk only in overall comparison. In contrast, no association was observed between either IL-1B-511 or −31 and sepsis risk in overall comparison or subgroup analyses.
IL-1B + 3594 polymorphism is a coding synonymous variant located in exon 5 of IL-1B. The transition from C to T does not change amino acid coding but may lead to an inactivation of the original splicing donor site. The alternative splicing results in a premature stop codon or exon skipping and produces a truncated protein that is likely to be rapidly degraded or functionally inactive . The IL1B + 3954 T allele has been reported to increase the production of IL-1β protein in response to LPS-stimulation . The results of our meta-analysis revealed that individuals with variant genotype (TT) were less susceptible to sepsis than individuals with CC or CT genotypes in overall comparison and Caucasian population, which was inconsistent with higher IL-1β levels associated with increased risk of sepsis. Considering that sepsis is a multifactorial trait and the impact of the inflammatory cytokine on sepsis progress may be modulated by other environmental and genetic factors, more studies should be conducted to clarify the role of IL-1B + 3594 polymorphism in the etiology of sepsis.
For the IL-1RN VNTR polymorphism, functional analysis in vitro has shown that the IL-1RN-2 allele correlated with high IL-1ra level and an even more elevated IL-1β level. This resulted in the lowest IL-1ra/IL-1β ratio and was associated with a strengthened and prolonged inflammatory response [37, 38]. In addition, Arnalich et al.  found that IL-1RN-2 allele causes a decreased production of serum IL-1Ra in patients with severe sepsis and ethnically matched healthy controls compared with 1 allele. These findings implied that the 86 bp VNTR polymorphism of the IL-1RN has potential roles in regulating the immune response and contributed to the pathogenesis of inflammatory diseases. Similarly, our meta-analysis indicated a significant association with risk of sepsis in overall comparison and stratified analysis based on different sepsis severity, which was not observed in ethnicity subgroup analysis. This indicates that the discrepancies between the overall and ethnicity subgroup analyses may be attributed to the diverse genetic backgrounds and environmental factors influencing sepsis risk in different ethnic populations. Further studies with larger samples and from homogeneous populations are warranted to further evaluate the role of the IL-1RN VNTR polymorphism in sepsis risk in different populations.
IL-1A-889 polymorphism, a C-to-T point mutation in its 5’ regulatory region, affected over-expression of IL-1α . In the current meta-analysis, there was significant association with sepsis susceptibility in overall comparison. However, only two studies were included into this meta-analysis with small samples. Thus, this finding needed to be confirmed with larger samples.
The −511 and −31 polymorphisms, which are located at position 511 bp and 31 bp upstream of the transcriptional start site, have been shown to influence the transcriptional activity and expression of the IL-1B gene. The presence of variant allele of IL-1B-511 markedly increased endotoxin-induced production of IL-1β . Moreover, IL1B-31C/T substitution located in the TATA box motif has been found to markedly affect the binding of several transcription factors and thereby affect the transcriptional activity . In addition, two bi-allelic SNPs (−511, and −31) within the human IL-1B promoter region have been reported to affect LPS-induced IL-1β transcription in vitro and IL-1β plasma levels in healthy adults . Although IL-1β plays an important role in sepsis and IL-1β is frequently over-expressed in sepsis, our meta-analysis indicated no significant association between the IL-1B-511 and −31 polymorphisms and sepsis risk, suggesting that IL-1β expression might influence sepsis progression via mechanisms other than regulation by the two promoter polymorphisms. Several other factors, such as IL-1RN and NLRP3 may also regulate IL-1β expression [41, 42]. Further studies are needed to test these hypotheses.
Sepsis is a multifactorial trait and the impact of the inflammatory cytokine on sepsis progress may be modulated by, age, gender and some other environmental factors . Interpretation of the pooled results has been hampered by the fact that several different clinical conditions such as sepsis, severe sepsis, or septic shock have been analyzed together according to the published consensus definitions for sepsis . In our stratified analyses, we also examined that whether the effect of polymorphisms differed depending on the way in which sepsis was described (sepsis, severe sepsis, or septic shock). Our results indicated the positive association was observed for IL-1B + 3594C/T in sepsis group patients, for IL-1RN VNTR polymorphism in sepsis, severe sepsis, and septic shock group patients, respectively. These findings indicated that the way in which sepsis was described affected the association between IL-1 polymorphisms and susceptibility to sepsis. However, what also needs to be pointed out is that these significant associations were derived from only one to two studies and thus the result should be interpreted with caution because of the relatively small sample size.
Heterogeneity is an important problem when interpreting the results of our meta-analysis. In this study, significant heterogeneity was found for the IL-1B-511, -31, and IL-1RN VNTR polymorphisms. Meta-regression did not seem to reveal the potential sources of heterogeneity with the introduction of covariates containing ethnicity, sepsis severity, sources of controls, sample size, which indicated that the heterogeneity might be attributable to other factors, which regrettably remain undefined due to insufficient data. Moreover, we carried out sensitivity analysis. Removal of each study did not seem to alter the relationships with sepsis risk and heterogeneity for IL-1B-511 and −31, suggesting the reliability of these results. However, removing one study by Garcia-Segarra et al. for IL-1RN VNTR obviously decreased the heterogeneity and increased positive association under all genetic models, which indicated this study may be the main cause of heterogeneity.
Another important problem is publication bias. Because meta-analyses review quantitative data from numerous studies, the publication bias effect of the literature incorporated in the study can bias the mea-analytic outcome. For IL-1RN VNTR polymorphism, although the Egger’s test did not show significant publication bias for sepsis risk, we found the shape of the funnel plot was slightly asymmetrical. Thus, the results should be interpreted cautiously and more studies are still needed to confirm the findings from this meta-analysis.
Some limitations of this meta-analysis should be pointed out. First, the number and sample size of the included studies was limited, some unpublished reports, non-English articles and studies without sufficient information were not included in our meta-analysis, which might bias the pooled results. Second, although the results in stratified analysis were more meaningful, there were a small number of studies in each stratum, thus limiting the interpretation of these analyses. Third, as none of the studies included in this meta-analysis considered the effect of gene-gene/environment involved in the pathogenesis of sepsis, this issue could not be addressed. Fourth, the overall outcome was based on unadjusted data, where as a more precise analysis stratified by variables such as age, sex, type of infection etc. could not be performed due to limitations of the data which also restricted our ability to detect possible sources of heterogeneity. Fifth, stratified analyses based on the different sources of controls were not performed due to small number of studies in each subgroup; the inclusion of studies with varied control populations might increase the probability of typeIerror and bias the pooled results. Finally, as we only focused on the associations between IL-1 polymorphisms and sepsis susceptibility in the present study, the significance was limited. To better illuminate the role of IL-1 polymorphisms in outcome of sepsis, it would also be important to perform meta-analyses on the associations between polymorphisms and severity or sepsis-related mortality in future studies.
To our knowledge, this is the first study that quantitatively synthesized the association between the IL-1 polymorphisms and sepsis. The results demonstrated that the IL-1A-889C/T, IL-1B-3594C/T, and IL-1RN VNTR polymorphisms had significant associations with the risk of sepsis, although some results were limited by the small number of studies. However, no significant association existed between IL-1B-511, -31 and sepsis risk. Further studies with large samples and homogeneous population are needed to evaluate their associations with sepsis risk.
Interleukin-1 receptor antagonist
Variable number of tandem repeats
Newcastle-Ottawa quality assessment scale
Polymerase chain reaction-restriction fragment length polymorphism.
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This work is supported by National Key Technology R&D Program (2012BAI11B01), Hundreds of outstanding science and technology leading talent research fund in Chongqing City, The Major State Basic Research Development Program of China (2012CB518102), National Natural Science Funds for Distinguished Young Scholar (81201462), and Open fund of State Key Laboratory of Trauma, Burns and Combined Injury, Third Military Medical University (SKLZZ201104). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
The authors declare that they have no competing interests.
A-QZ and WP was the main researcher for this study and took part in conceptualization, literature review, data extraction, analysis, writing of the manuscript. J-WG, C-LY and LZ were involved in software used, data analysis and final editing. WG did to guide the statistical analysis and manuscript editing. J-XJ planned the study, wrote the protocol and was involved in the genetic and clinical aspects of data analyses and revised the manuscript. All authors read and approved the final manuscript.
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Additional file 2: Figure S1-S5: Forest plot of sepsis susceptibility associated with IL-1 polymorphisms under a random-effect model. (PDF 553 KB)
Additional file 3: Table S2-S4: Meta-regression of sepsis susceptibility associated with IL-1RN VNTR polymorphism under a random-effect model with covariates of ethnicity, sepsis severity, sources of controls and sample size. (DOCX 14 KB)
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Zhang, Aq., Pan, W., Gao, Jw. et al. Associations between interleukin-1 gene polymorphisms and sepsis risk: a meta-analysis. BMC Med Genet 15, 8 (2014). https://0-doi-org.brum.beds.ac.uk/10.1186/1471-2350-15-8