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Table 4 Likelihood ratio tests (LRT) to determine independent effects across the 10q26.3 region

From: Genetic and functional evidence for a locus controlling otitis media at chromosome 10q26.3

Null model

Alternative modela

LRT χ2

PLRT-value

Adding ADAM12 SNP

DOCK1/rs9418832

rs9418832 + rs7902734

13.89

1.94 × 10-4

Intergenic/rs7922424

rs7922424 + rs7902734

9.88

0.0017

rs9418832 + rs7922424

rs9418832 + rs7922424 + rs7902734

12.37

4.37 × 10-4

Adding DOCK1 SNP

ADAM12/rs7902734

rs7902734 + rs9418832

18.12

2.07 × 10-5

Intergenic/rs7922424

rs7922424 + rs9418832

16.31

5.39 × 10-5

rs7902734 + rs7922424

rs7902734 + rs7922424 + rs9418832

18.80

1.45 × 10-5

Adding TCERG1L_PPP2R2D intergenic SNP

ADAM12/rs7902734

rs7902734 + rs7922424

17.92

2.31 × 10-5

DOCK1/rs9418832

rs9418832 + rs7922424

20.11

7.30 × 10-6

rs7902734 + rs9418832

rs7902734 + rs9418832 + rs7922424

18.60

1.61 × 10-5

  1. amarker added to the null model in the alternative model is highlighted in bold.