Table 2 RF modeling, filtered data, approach I
From: Data mining of high density genomic variant data for prediction of Alzheimer's disease risk
Data | RF | 10-Fold | CV | % | Â | Error |
|---|---|---|---|---|---|---|
(APOEε4+ & ε4- samples) | Number of Trees | F = 7 | F = 11 | F = 18 | F = 32 | F = 42 |
APOE & 10 GAB2 SNPs | Â | Â | Â | Â | Â | Â |
| Â | 100 | 33.3 | 33.2 | Â | Â | Â |
| Â | 300 | 33.3 | 33.2 | Â | Â | Â |
| Â | 600 | 33.4 | 33.5 | Â | Â | Â |
199 SNPs | Â | Â | Â | Â | Â | Â |
| Â | 100 | Â | 11.9 | 12.3 | 12.5 | 12.3 |
| Â | 300 | Â | 11.3 | 11.3 | 12.1 | 11.6 |
| Â | 600 | Â | 10.6 | 11.6 | 11.2 | 11.1 |
APOE & 199 SNPs | Â | Â | Â | Â | Â | Â |
| Â | 100 | Â | 10.9 | 9.9 | 10.4 | 10.3 |
| Â | 300 | Â | 8.9 | 9.6 | 9.5 | 10.3 |
| Â | 600 | Â | 9.0 | 9.1 | 10.1 | 9.9 |
APOE , 10 GAB2 , & 199 SNPs | Â | Â | Â | Â | Â | Â |
| Â | 100 | Â | 9.9 | 10.1 | 9.9 | 11.2 |
| Â | 300 | Â | 8.9 | 9.1 | 9.5 | 10.3 |
| Â | 600 | Â | 9.1 | 9.4 | 9.9 | 10.3 |