Haplotype* | rs3806933 | rs2289276 | rs2289278 | Control | GD |
p value** | OR (95% CI) |
---|
Ht1 | C | C | C | 60 | 433 | 0.09 | 1.35 (0.95–1.9) |
Ht2 | C | C | G | 37 | 205 | 0.56 | 0.89 (0.59–1.32) |
Ht3 | T | C | C | 5 | 93 | 0.007 | 3.28 (1.31–8.21) |
Ht4 | T | T | C | 39 | 200 | 0.27 | 0.8 (0.54–1.19) |
Ht5 | T | C | G | 12 | 2 | 1 × 10−14
| 0.03 (0.01–0.11) |
- * The haplotypes were identified by the Bayesian statistical method available in the program Phase 2.1.
- ** The chi-square test (2 × 2 table) was performed to obtain the p value. For example, the numbers of haplotypes of control and GD with Ht1 were compared with the numbers of control and GD without Ht1. A p value < 0.01 was considered as statistically significant. Only haplotype with a frequency of 0.01 or above in either cases or controls are shown.