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Table 1 Genotype distribution of the RET gene polymorphisms in case-control

From: Genetic variants in RET and risk of Hirschsprung's disease in Southeastern Chinese: a haplotype-based analysis

Polymorphism

Genotypes

Controls n = 168

cases n = 123

ORb(95% CI); P

-5G > A, rs10900296 a

GG

50 (29.8)

7 (5.7)

Reference

 

GA

83 (49.4)

29 (23.9)

2.50 (1.02-6.12); 0.046

 

AA

35 (20.8)

87 (67.4)

17.75 (7.34-42.92); < 0.001

-1A > C, rs10900297 b

AA

22 (13.1)

3 (2.4)

Reference

 

AC

80 (47.6)

22 (17.9)

2.02 (0.55-7.38); 0.288

 

CC

66 (39.3)

98 (79.7)

10.89 (3.13-37.85); < 0.001

c135G > A, rs1800858 c

GG

52 (31.0)

10 (8.1)

Reference

 

GA

85 (50.6)

32 (26.0)

1.95 (0.89-4.32); 0.095

 

AA

31 (18.4)

81 (65.9)

13.61 (6.14-30.14); < 0.001

C1296A > G, rs1800860 d

AA

6 (3.6)

0 (0.0)

Reference

 

AG

54 (32.1)

23 (18.7)

 
 

GG

108 (64.3)

100 (81.3)

2.40 (1.38-4.18); 0.002

c2307T > G, rs1800861 e

TT

37 (22.0)

9 (7.3)

Reference

 

TG

95 (56.6)

26 (21.1)

1.08 (0.46-2.53); 0.853

 

GG

36 (21.4)

88 (71.6)

9.79 (4.28-22.43); < 0.001

  1. a p = 1.12 × 10-16, b p = 3.43 × 10-11, c p = 4.20 × 10-15, d p = 5.70 × 10-4, e p = 2.32 × 10-14, for Cochran-Armitage trend test.