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Table 2 Primer sequences and DHPLC analysis conditions for two sets of designed primers.

From: Frequency of single nucleotide polymorphisms in NOD1gene of ulcerative colitis patients: a case-control study in the Indian population

Exon

Primer sequence (5'-3')

Ampli. size(bp)

PCR anneal. temp.°C

DHPLC Oven temp.°C

Start % buffer B

N1Ex6-1

F 5' AGCAGGTATACCCAGCAGCTGC 3'

R 5' CCCGCTCTGGGTAGCAGTAGTG 3'

412

65.3

63.5

59-57

N1Ex6-2

F 5'CTACTGCTA CCAGAGCGGGA 3'

R 5'CCGGAAGATGATCCAGCAGAA 3'

427

55

64.5

59-57