From: An Open Access Database of Genome-wide Association Results
Methodological description (array(s), calling algorithm, DNA extraction method, DNA pooling) |
Full disclosure of SNP list genotyped, with genomic build and position |
Genotyped strand and call rates for each SNP |
QC filtering criteria employed |
Sample sizes for all analyzed populations and indication of genotyping conducted for each |
Sample demographics: gender, mean age, ethnogeographic make-up, geographic coordinates |
Specific phenotype description(s) |
Description of analytical and statistical procedures applied (genetic models, imputation, etc.) |
Full p-values and effects estimates (such as direction of effect with respect to alleles, beta coefficients and standard errors) for association in main GWAS scans, and for meta-analysis if done across scans |
List of SNPs with genomic build and position for which replication was attempted |
Appropriate measures to mask group and individual identification if data are posted publicly |
Contact information for submitters and parties responsible for portions of the GWAS |