|  |  | Minor allele frequency (MAF) | P values for crude associationb | |||
---|---|---|---|---|---|---|---|
SNP | Alleles (major/minor) | Locationa | Cases | Controls | Genotypic recessive | Genotypic additive | Genotypic dominant |
rs4745363 (46) | T>A | Intron 1 | 0.46 | 0.42 | 0.08 | 0.18 | 0.59 |
rs10869447 (45) | A>G | Intron 3 | 0.39 | 0.35 | 0.05 | 0.25 | 0.79 |
rs11144108 (44) | T>G | Intron 6 | 0.36 | 0.35 | 0.20 | 0.67 | 0.77 |
rs7867868 (43) | C>T | Intron 6 | 0.33 | 0.32 | 0.56 | 0.75 | 0.41 |
rs7045949 c(42) | C>T (in only European whites) | Intron 7 | 0.41 | 0.42 | 0.91 | 0.76 | 0.59 |
rs1012710 (41) | T>C | Intron 12 | 0.30 | 0.30 | 0.93 | 0.97 | 0.91 |
rs10512038 (40) | T>C | Intron 14 | 0.25 | 0.28 | 0.83 | 0.28 | 0.21 |
rs7859201d(39) | A>C (Leu708Leu) | Exon 17 | 0.39 | 0.43 | 0.32 | 0.11 | 0.13 |
rs3858116 (38) | G>A | Intron 18 | 0.38 | 0.40 | 0.78 | 0.46 | 0.39 |
rs2151424 (37) | C>T | Intron 19 | 0.26 | 0.28 | 0.13 | 0.37 | 0.74 |
rs2151423 (36) | A>G (whites only) | Intron 19 | 0.45 | 0.46 | 0.43 | 0.91 | 0.60 |
rs6560408 (35) | C>T | Intron 23 | 0.39 | 0.40 | 0.90 | 0.74 | 0.56 |
rs3750425e(34) | G>A (Val1393Ile) | Exon 26 | 0.097 | 0.095 | 0.29 | 0.86 | 0.89 |
rs2274924f(33) | A>G (Lys1584Glu) | Exon 27 | 0.18 | 0.18 | 0.42 | 0.79 | 0.51 |
rs2769195 (32) | T>C | Intron 27 | 0.44 | 0.42 | 0.03 | 0.33 | 0.69 |
rs1327824 (31) | G>C | Intron 31 | 0.09 | 0.11 | 0.50 | 0.46 | 0.53 |
rs875034 (30) | A>G | Intron 33 | 0.42 | 0.42 | 0.91 | 0.84 | 0.83 |
rs944857 (29)g | T>C | Intron 36 | 0.02 | 0.009 | -- | 0.07 | 0.07 |
rs539079 (28) | A>G | Intron 36 | 0.10 | 0.09 | 0.67 | 0.91 | 0.99 |
rs514348 (27) | T>A | Intron 38 | 0.41 | 0.40 | 0.09 | 0.80 | 0.35 |
TRPM7 | Â | Â | Â | Â | Â | Â | Â |
rs8042919h(51) | G>A (Thr1482Ile) | Exon 28 | 0.10 | 0.12 | 0.27 | 0.19 | 0.27 |
rs3109881(50) | G>A | 3'UTR | 0.36 | 0.41 | 0.15 | 0.04 | 0.07 |
rs10519279 (49) | G>C | 3'UTR | 0.16 | 0.19 | 0.40 | 0.19 | 0.22 |
rs3131597 (48) | C>T | 3'UTR | 0.41 | 0.46 | 0.10 | 0.13 | 0.36 |
rs3098198 (47) | A>G | 3'UTR | 0.47 | 0.41 | 0.13 | 0.03 | 0.03 |