Skip to main content

Table 3 Analysis of LXR haplotypes in T2D in the French cohort

From: Functional and genetic analysis in type 2 diabetes of Liver X receptor alleles – a cohort study

Block

Specific haplotype (%)

nominal

 

Case

Controls

P Value

LXRA: rs4752822- rs61896015- rs12221497- rs2279239- rs2279238

TCGTC

75.1

75.9

0.56

CAACC

13.1

12.0

0.32

CCGCT

11.8

12.1

0.80

LXRB: rs35463555- rs17373080- rs2248949

GCT

41.0

40.6

0.81

AGC

31.7

33.0

0.41

GCC

27.2

26.4

0.55

  1. Haplotype frequencies in cases versus controls are compared by Chi2 test. Counts for association tests are obtained by summing the fractional likelihoods of each individual for each haplotype.